Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter protein lptc | SAMN05444145_102289 | Not Available | Negative | 1007316 - 1008068 | 28279.5 |
| hypothetical protein | SAMN05444145_102290 | Not Available | Negative | 1008090 - 1009427 | 49406.9 |
| hypothetical protein | SAMN05444145_102291 | Not Available | Negative | 1009466 - 1010845 | 50814.2 |
| type iii pantothenate kinase | SAMN05444145_102292 | Not Available | Negative | 1010820 - 1011560 | 26953.5 |
| transcription-repair coupling factor (superfamily ii helicase) | SAMN05444145_102293 | Not Available | Negative | 1011557 - 1014895 | 124311.0 |
| ribonuclease g | SAMN05444145_102294 | Not Available | Negative | 1014899 - 1016455 | 58488.3 |
| hypothetical protein | SAMN05444145_102295 | Not Available | Negative | 1016722 - 1016811 | 3687.77 |
| dna-binding protein hu-beta | SAMN05444145_102296 | Not Available | Negative | 1016849 - 1017121 | 9895.18 |
| response regulator receiver domain-containing protein | SAMN05444145_102297 | Not Available | Positive | 1017476 - 1019026 | 59962.3 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05444145_102298 | Not Available | Positive | 1019027 - 1019443 | 15689.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
