Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylglucosamine-6-phosphate deacetylase | SAMN05444145_102279 | Not Available | Positive | 991596 - 992846 | 44049.1 |
| l-glutamine synthetase | SAMN05444145_102280 | Not Available | Negative | 992922 - 995099 | 81423.6 |
| heterodimeric methylmalonyl-coa mutase small subunit | SAMN05444145_102281 | Not Available | Positive | 995686 - 997533 | 67743.2 |
| heterodimeric methylmalonyl-coa mutase large subunit precursor | SAMN05444145_102282 | Not Available | Positive | 997536 - 999674 | 78090.7 |
| hypothetical protein | SAMN05444145_102283 | Not Available | Positive | 999797 - 1001335 | 56466.2 |
| hypothetical protein | SAMN05444145_102284 | Not Available | Positive | 1001357 - 1001704 | 12732.1 |
| hypothetical protein | SAMN05444145_102285 | Not Available | Positive | 1001860 - 1002420 | 20248.5 |
| nadp-dependent alcohol dehydrogenase | SAMN05444145_102286 | Not Available | Negative | 1002490 - 1003632 | 41898.3 |
| peptidyl-prolyl cis-trans isomerase d | SAMN05444145_102287 | Not Available | Negative | 1003821 - 1005854 | 73019.2 |
| hemolysin, contains cbs domains | SAMN05444145_102288 | Not Available | Negative | 1006048 - 1007310 | 47591.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
