Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN05444145_102269 | Not Available | Negative | 976486 - 977625 | 43607.3 |
| lysophospholipase l1 | SAMN05444145_102270 | Not Available | Positive | 977806 - 978573 | 28409.6 |
| lysophospholipase l1 | SAMN05444145_102271 | Not Available | Positive | 978580 - 979362 | 28883.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_102272 | Not Available | Positive | 979395 - 982583 | 118088.0 |
| starch-binding associating with outer membrane | SAMN05444145_102273 | Not Available | Positive | 982586 - 984529 | 71791.2 |
| hypothetical protein | SAMN05444145_102274 | Not Available | Positive | 984546 - 986546 | 72090.4 |
| hypothetical protein | SAMN05444145_102275 | Not Available | Positive | 986560 - 988332 | 63704.1 |
| glucosamine-6-phosphate deaminase | SAMN05444145_102276 | Not Available | Positive | 988362 - 989126 | 28258.0 |
| hypothetical protein | SAMN05444145_102277 | Not Available | Positive | 989144 - 990115 | 34053.8 |
| mfs transporter, acs family, hexuronate transporter | SAMN05444145_102278 | Not Available | Positive | 990128 - 991594 | 53201.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
