Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| probable dna metabolism protein | SAMN05444145_10135 | Not Available | Positive | 46635 - 47396 | 29939.8 |
| hypothetical protein | SAMN05444145_10136 | Not Available | Negative | 47413 - 47976 | 21334.1 |
| Trna-ser | Not Available | Not Available | Positive | 48028 - 48119 | Not Available |
| protein of unknown function | SAMN05444145_10138 | Not Available | Positive | 48350 - 49525 | 44460.4 |
| iron-regulated abc transporter membrane component sufb | SAMN05444145_10139 | Not Available | Positive | 49713 - 51158 | 53485.4 |
| nadph-dependent fmn reductase | SAMN05444145_10140 | Not Available | Positive | 51166 - 51738 | 20898.1 |
| fe-s cluster assembly atp-binding protein | SAMN05444145_10141 | Not Available | Positive | 51732 - 52484 | 27670.6 |
| fe-s cluster assembly protein sufd | SAMN05444145_10142 | Not Available | Positive | 52484 - 53305 | 29278.9 |
| cysteine desulfurase / selenocysteine lyase | SAMN05444145_10143 | Not Available | Positive | 53305 - 54528 | 44305.2 |
| dtmp kinase | SAMN05444145_10144 | Not Available | Positive | 54695 - 55381 | 25511.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
