Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arabinose-5-phosphate isomerase | SAMN05444145_102249 | Not Available | Negative | 949330 - 950295 | 34403.1 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05444145_102250 | Not Available | Negative | 950296 - 951042 | 26876.6 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | SAMN05444145_102251 | Not Available | Negative | 951050 - 951796 | 27625.9 |
| atp-dependent lon protease | SAMN05444145_102252 | Not Available | Negative | 951941 - 954373 | 89980.7 |
| valyl-trna synthetase | SAMN05444145_102253 | Not Available | Positive | 954487 - 957114 | 99487.7 |
| rnase hi | SAMN05444145_102254 | Not Available | Positive | 957310 - 957774 | 17184.4 |
| atp-binding cassette, subfamily b, msba | SAMN05444145_102255 | Not Available | Positive | 958073 - 959902 | 68304.0 |
| signal transduction histidine kinase | SAMN05444145_102256 | Not Available | Positive | 959938 - 961422 | 55655.3 |
| isoleucyl-trna synthetase | SAMN05444145_102257 | Not Available | Positive | 961511 - 964906 | 128041.0 |
| transcriptional regulator, trar/dksa family | SAMN05444145_102258 | Not Available | Positive | 964988 - 965368 | 14413.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
