Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_102239 | Not Available | Positive | 926596 - 926733 | 5172.24 |
| tonb-dependent receptor | SAMN05444145_102240 | Not Available | Negative | 926859 - 929927 | 114334.0 |
| glycosyl hydrolases family 2 | SAMN05444145_102241 | Not Available | Negative | 929959 - 933795 | 143221.0 |
| arylsulfatase a | SAMN05444145_102242 | Not Available | Negative | 933803 - 935434 | 61942.8 |
| arylsulfatase | SAMN05444145_102243 | Not Available | Negative | 935431 - 937029 | 61016.9 |
| uncharacterized sulfatase | SAMN05444145_102244 | Not Available | Negative | 937054 - 938592 | 56846.4 |
| glycosyl hydrolases family 2 | SAMN05444145_102245 | Not Available | Negative | 938589 - 941711 | 119296.0 |
| two component regulator propeller | SAMN05444145_102246 | Not Available | Positive | 941999 - 946051 | 151791.0 |
| heparinase ii/iii-like protein | SAMN05444145_102247 | Not Available | Positive | 946201 - 948126 | 71574.5 |
| rhamnogalacturonyl hydrolase yesr | SAMN05444145_102248 | Not Available | Positive | 948149 - 949234 | 40733.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
