Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted purr-regulated permease perm | SAMN05444145_102229 | Not Available | Negative | 915988 - 917094 | 40108.7 |
| phosphatidylserine decarboxylase | SAMN05444145_102230 | Not Available | Negative | 917099 - 917782 | 26068.0 |
| phosphatidate cytidylyltransferase | SAMN05444145_102231 | Not Available | Negative | 917802 - 918638 | 29907.4 |
| cell division protease ftsh | SAMN05444145_102232 | Not Available | Negative | 918687 - 920741 | 74886.7 |
| ribosome-associated protein | SAMN05444145_102233 | Not Available | Negative | 920787 - 921245 | 17498.1 |
| hypothetical protein | SAMN05444145_102234 | Not Available | Positive | 921342 - 921854 | 18632.9 |
| lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator | SAMN05444145_102235 | Not Available | Negative | 921921 - 922820 | 33426.7 |
| tryptophanyl-trna synthetase | SAMN05444145_102236 | Not Available | Positive | 923028 - 924152 | 42161.4 |
| chloride channel protein, cic family | SAMN05444145_102237 | Not Available | Positive | 924157 - 925938 | 65684.5 |
| pas fold-containing protein | SAMN05444145_102238 | Not Available | Positive | 925940 - 926275 | 12828.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
