Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcineurin-like phosphoesterase | SAMN05444145_102219 | Not Available | Negative | 902846 - 903862 | 37557.5 |
| glycosyl hydrolase family 63 c-terminal domain-containing protein | SAMN05444145_102220 | Not Available | Negative | 903878 - 905491 | 62612.8 |
| alkaline phosphatase | SAMN05444145_102221 | Not Available | Negative | 905498 - 907429 | 70913.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_102222 | Not Available | Negative | 907442 - 908281 | 30895.6 |
| alpha-1,2-mannosidase, putative | SAMN05444145_102223 | Not Available | Negative | 908289 - 911171 | 106110.0 |
| laci family transcriptional regulator | SAMN05444145_102224 | Not Available | Positive | 911380 - 912036 | 24688.1 |
| laci family transcriptional regulator | SAMN05444145_102225 | Not Available | Positive | 912117 - 912557 | 16913.4 |
| hypothetical protein | SAMN05444145_102226 | Not Available | Positive | 912657 - 914075 | 53623.3 |
| adenosylhomocysteinase | SAMN05444145_102227 | Not Available | Negative | 914209 - 915618 | 52063.6 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05444145_102228 | Not Available | Negative | 915623 - 915988 | 13801.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
