Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bnr repeat-like domain-containing protein | SAMN05444145_102209 | Not Available | Positive | 889656 - 891476 | 65960.2 |
| pantoate--beta-alanine ligase | SAMN05444145_102210 | Not Available | Positive | 891621 - 892457 | 31105.3 |
| l-aspartate 1-decarboxylase | SAMN05444145_102211 | Not Available | Positive | 892459 - 892818 | 13328.2 |
| hypothetical protein | SAMN05444145_102212 | Not Available | Positive | 892925 - 893437 | 17991.4 |
| hypothetical protein | SAMN05444145_102213 | Not Available | Negative | 893575 - 894417 | 30572.2 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_102214 | Not Available | Negative | 894446 - 895273 | 30523.6 |
| starch-binding associating with outer membrane | SAMN05444145_102215 | Not Available | Negative | 895298 - 896932 | 61328.6 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_102216 | Not Available | Negative | 896945 - 900133 | 116724.0 |
| hexosaminidase | SAMN05444145_102217 | Not Available | Negative | 900388 - 902022 | 60768.7 |
| glucokinase | SAMN05444145_102218 | Not Available | Negative | 902028 - 902849 | 29679.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
