Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dipeptidyl-peptidase-3 | SAMN05444145_102199 | Not Available | Negative | 866815 - 868815 | 75930.7 |
| fimbrillin-like | SAMN05444145_102200 | Not Available | Positive | 869318 - 870883 | 56284.3 |
| bnr repeat-like domain-containing protein | SAMN05444145_102201 | Not Available | Positive | 870923 - 872716 | 67082.5 |
| signal transduction histidine kinase | SAMN05444145_102202 | Not Available | Positive | 872722 - 876732 | 150099.0 |
| glycosyl hydrolases family 2 | SAMN05444145_102203 | Not Available | Positive | 876838 - 878655 | 68786.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_102204 | Not Available | Positive | 878716 - 881976 | 121342.0 |
| starch-binding associating with outer membrane | SAMN05444145_102205 | Not Available | Positive | 881992 - 883758 | 66794.8 |
| tfp pilus assembly protein pilf | SAMN05444145_102206 | Not Available | Positive | 883783 - 887085 | 125188.0 |
| uncharacterized sulfatase | SAMN05444145_102207 | Not Available | Positive | 887098 - 888486 | 52047.1 |
| aldose 1-epimerase | SAMN05444145_102208 | Not Available | Positive | 888483 - 889628 | 42027.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
