Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid-a-disaccharide kinase | SAMN05444145_102189 | Not Available | Negative | 858598 - 859641 | 39753.7 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN05444145_102190 | Not Available | Positive | 859790 - 861085 | 47704.6 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05444145_102191 | Not Available | Positive | 861090 - 861827 | 26280.2 |
| ph domain-containing protein | SAMN05444145_102192 | Not Available | Positive | 861811 - 862347 | 20993.2 |
| rubredoxin | SAMN05444145_102193 | Not Available | Positive | 862389 - 862553 | 6036.01 |
| cysteine synthase | SAMN05444145_102194 | Not Available | Positive | 862949 - 863908 | 33422.4 |
| serine o-acetyltransferase | SAMN05444145_102195 | Not Available | Positive | 863905 - 864774 | 30882.9 |
| hypothetical protein | SAMN05444145_102196 | Not Available | Positive | 865032 - 865565 | 18985.6 |
| hypothetical protein | SAMN05444145_102197 | Not Available | Positive | 865710 - 866288 | 21530.2 |
| hypothetical protein | SAMN05444145_102198 | Not Available | Positive | 866298 - 866648 | 12326.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
