Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05444145_102169 | Not Available | Negative | 833955 - 834767 | 28930.1 |
| gscfa family protein | SAMN05444145_102170 | Not Available | Positive | 834801 - 835766 | 35511.2 |
| predicted pyrophosphatase or phosphodiesterase, alkp superfamily | SAMN05444145_102171 | Not Available | Positive | 835792 - 837357 | 57688.4 |
| cysteine desulfuration protein sufe | SAMN05444145_102172 | Not Available | Positive | 837380 - 837796 | 15573.7 |
| fes assembly suf system protein | SAMN05444145_102173 | Not Available | Positive | 837828 - 838148 | 11922.6 |
| protein of unknown function | SAMN05444145_102174 | Not Available | Positive | 838151 - 839140 | 37674.0 |
| d-alanyl-lipoteichoic acid acyltransferase dltb, mboat superfamily | SAMN05444145_102175 | Not Available | Positive | 839216 - 840679 | 55634.8 |
| hypothetical protein | SAMN05444145_102176 | Not Available | Positive | 840687 - 841628 | 36196.7 |
| protein translocase subunit seca | SAMN05444145_102177 | Not Available | Positive | 841734 - 845027 | 124855.0 |
| dcmp deaminase | SAMN05444145_102178 | Not Available | Positive | 845080 - 845517 | 16184.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
