Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nigd-like protein | SAMN05444145_102159 | Not Available | Positive | 823138 - 823851 | 26494.1 |
| beta-glucosidase | SAMN05444145_102160 | Not Available | Positive | 824046 - 826460 | 89076.9 |
| holliday junction dna helicase subunit ruvb | SAMN05444145_102161 | Not Available | Positive | 826584 - 827591 | 36594.2 |
| malate dehydrogenase (oxaloacetate-decarboxylating)(nadp+) | SAMN05444145_102162 | Not Available | Positive | 827784 - 829064 | 46190.7 |
| 3-dehydroquinate synthase | SAMN05444145_102163 | Not Available | Negative | 829098 - 830114 | 36826.8 |
| gtp-binding protein | SAMN05444145_102164 | Not Available | Positive | 830196 - 831998 | 66992.9 |
| hypothetical protein | SAMN05444145_102165 | Not Available | Positive | 832008 - 832322 | 10948.6 |
| protein of unknown function | SAMN05444145_102166 | Not Available | Positive | 832412 - 833041 | 23742.9 |
| hypothetical protein | SAMN05444145_102167 | Not Available | Negative | 833044 - 833409 | 13676.4 |
| ribose 5-phosphate isomerase b | SAMN05444145_102168 | Not Available | Positive | 833504 - 833947 | 16094.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
