Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_10125 | Not Available | Negative | 32943 - 34505 | 57958.6 |
| protein of unknown function | SAMN05444145_10126 | Not Available | Negative | 34599 - 35795 | 42780.5 |
| outer membrane receptor for ferrienterochelin and colicins | SAMN05444145_10127 | Not Available | Negative | 35836 - 38673 | 104664.0 |
| inosine-5'-monophosphate dehydrogenase | SAMN05444145_10128 | Not Available | Positive | 38950 - 40428 | 52615.6 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444145_10129 | Not Available | Positive | 40442 - 41971 | 55656.1 |
| dna polymerase-3 subunit epsilon | SAMN05444145_10130 | Not Available | Positive | 42234 - 42728 | 18373.8 |
| phosphate-selective porin o and p | SAMN05444145_10131 | Not Available | Negative | 42770 - 44032 | 48144.2 |
| cold-shock dna-binding protein family | SAMN05444145_10132 | Not Available | Positive | 44399 - 44845 | 16879.8 |
| rna recognition motif. (a.k.a. rrm, rbd, or rnp domain) | SAMN05444145_10133 | Not Available | Positive | 44881 - 45198 | 11363.1 |
| putative dna modification/repair radical sam protein | SAMN05444145_10134 | Not Available | Positive | 45382 - 46629 | 47675.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
