Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose-phosphate 3-epimerase | SAMN05444145_102139 | Not Available | Negative | 803013 - 803663 | 22800.8 |
| hypothetical protein | SAMN05444145_102140 | Not Available | Negative | 803855 - 805054 | 43731.3 |
| putative abc transport system atp-binding protein | SAMN05444145_102141 | Not Available | Negative | 805051 - 805698 | 23343.8 |
| protein of unknown function | SAMN05444145_102142 | Not Available | Negative | 805771 - 807342 | 55946.0 |
| dna recombination protein rmuc | SAMN05444145_102143 | Not Available | Positive | 807501 - 808922 | 53910.7 |
| hypothetical protein | SAMN05444145_102144 | Not Available | Negative | 808958 - 809509 | 20824.9 |
| trna threonylcarbamoyladenosine biosynthesis protein tsab | SAMN05444145_102145 | Not Available | Negative | 809524 - 810231 | 25359.1 |
| hypothetical protein | SAMN05444145_102146 | Not Available | Negative | 810243 - 811022 | 27841.5 |
| ssra-binding protein | SAMN05444145_102147 | Not Available | Negative | 811019 - 811483 | 17923.8 |
| dna primase | SAMN05444145_102148 | Not Available | Negative | 811656 - 813629 | 74403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
