Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactokinase | SAMN05444145_102129 | Not Available | Negative | 790815 - 791942 | 41423.2 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444145_102130 | Not Available | Positive | 792193 - 792957 | 28420.5 |
| transcriptional regulator, deor family | SAMN05444145_102131 | Not Available | Negative | 793133 - 793927 | 28684.7 |
| glycerol-3-phosphate dehydrogenase | SAMN05444145_102132 | Not Available | Positive | 794134 - 795705 | 58131.3 |
| mfs transporter, opa family, glycerol-3-phosphate transporter | SAMN05444145_102133 | Not Available | Positive | 795887 - 797236 | 50231.1 |
| hypothetical protein | SAMN05444145_102134 | Not Available | Negative | 797247 - 797822 | 21726.4 |
| protein of unknown function | SAMN05444145_102135 | Not Available | Negative | 797819 - 799546 | 65873.1 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | SAMN05444145_102136 | Not Available | Negative | 799707 - 800444 | 26812.6 |
| atp-binding cassette, subfamily f, member 3 | SAMN05444145_102137 | Not Available | Negative | 800437 - 802383 | 73769.8 |
| putative hydrolases of hd superfamily | SAMN05444145_102138 | Not Available | Positive | 802463 - 803023 | 21164.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
