Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac-type dna-binding protein | SAMN05444145_102118 | Not Available | Negative | 779325 - 780257 | 35967.5 |
| l-rhamnulokinase | SAMN05444145_102119 | Not Available | Positive | 780447 - 781922 | 53745.5 |
| l-rhamnose isomerase | SAMN05444145_102120 | Not Available | Positive | 781942 - 783198 | 47477.4 |
| l-rhamnose-h+ transport protein | SAMN05444145_102121 | Not Available | Positive | 783202 - 784230 | 35948.8 |
| l-rhamnulose 1-phosphate aldolase | SAMN05444145_102122 | Not Available | Positive | 784244 - 785047 | 29694.8 |
| alpha-galactosidase | SAMN05444145_102123 | Not Available | Positive | 785055 - 786635 | 59180.8 |
| protein of unknown function | SAMN05444145_102124 | Not Available | Negative | 786709 - 787467 | 27407.9 |
| [acyl-carrier-protein] s-malonyltransferase | SAMN05444145_102126 | Not Available | Positive | 787896 - 788777 | 30841.3 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444145_102127 | Not Available | Positive | 788939 - 790168 | 45442.8 |
| diamine n-acetyltransferase | SAMN05444145_102128 | Not Available | Positive | 790168 - 790701 | 20576.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
