Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-sedoheptulose 7-phosphate isomerase | SAMN05444145_102107 | Not Available | Positive | 761961 - 762539 | 20880.1 |
| ig-like domain (group 2) | SAMN05444145_102108 | Not Available | Positive | 762577 - 764526 | 70416.5 |
| alpha-galactosidase | SAMN05444145_102109 | Not Available | Positive | 764561 - 766648 | 79780.5 |
| alpha-galactosidase | SAMN05444145_102110 | Not Available | Positive | 766662 - 768740 | 77820.0 |
| metal-dependent hydrolase, beta-lactamase superfamily ii | SAMN05444145_102111 | Not Available | Positive | 768745 - 769614 | 32560.1 |
| endonuclease/exonuclease/phosphatase family protein | SAMN05444145_102112 | Not Available | Positive | 769645 - 771264 | 58378.6 |
| hypothetical protein | SAMN05444145_102113 | Not Available | Positive | 771285 - 773099 | 68706.3 |
| hypothetical protein | SAMN05444145_102114 | Not Available | Positive | 773136 - 774395 | 47463.2 |
| pkd-like domain-containing protein | SAMN05444145_102116 | Not Available | Positive | 774860 - 776593 | 63370.1 |
| alpha-l-rhamnosidase | SAMN05444145_102117 | Not Available | Negative | 776660 - 779290 | 98159.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
