Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN05444145_10297 | Not Available | Positive | 742259 - 743284 | 38858.6 |
| fucose permease | SAMN05444145_10298 | Not Available | Positive | 743360 - 744526 | 41528.7 |
| hypothetical protein | SAMN05444145_10299 | Not Available | Negative | 744645 - 745910 | 45903.9 |
| hypothetical protein | SAMN05444145_102100 | Not Available | Negative | 746138 - 747346 | 43862.1 |
| starch-binding associating with outer membrane | SAMN05444145_102101 | Not Available | Negative | 747391 - 749343 | 72930.9 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_102102 | Not Available | Negative | 749373 - 752441 | 113094.0 |
| starch-binding associating with outer membrane | SAMN05444145_102103 | Not Available | Negative | 752468 - 754339 | 70484.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_102104 | Not Available | Negative | 754361 - 757636 | 121538.0 |
| beta-mannosidase | SAMN05444145_102105 | Not Available | Positive | 758538 - 760946 | 91741.6 |
| glucokinase | SAMN05444145_102106 | Not Available | Positive | 760985 - 761947 | 34112.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
