Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | SAMN05444145_10287 | Not Available | Positive | 727378 - 728424 | 38586.8 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444145_10288 | Not Available | Positive | 728533 - 729639 | 39642.6 |
| mannose-6-phosphate isomerase, type 1 | SAMN05444145_10289 | Not Available | Positive | 729799 - 730764 | 35208.4 |
| phosphotransferase enzyme family protein | SAMN05444145_10290 | Not Available | Positive | 730913 - 732010 | 41606.2 |
| carbohydrate-binding family 9 | SAMN05444145_10291 | Not Available | Positive | 732014 - 732661 | 24772.2 |
| glucosamine-6-phosphate deaminase | SAMN05444145_10292 | Not Available | Positive | 732835 - 734784 | 73888.1 |
| glucosamine-6-phosphate deaminase | SAMN05444145_10293 | Not Available | Positive | 734804 - 735604 | 29830.6 |
| alpha-l-rhamnosidase | SAMN05444145_10294 | Not Available | Negative | 735674 - 738883 | 116993.0 |
| lactaldehyde reductase | SAMN05444145_10295 | Not Available | Negative | 738896 - 740050 | 40660.8 |
| alpha-l-rhamnosidase | SAMN05444145_10296 | Not Available | Negative | 740072 - 741847 | 65575.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
