Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05444145_10257 | Not Available | Positive | 690707 - 691561 | 31657.0 |
| putative beta-lactamase-inhibitor-like, pepsy-like | SAMN05444145_10258 | Not Available | Positive | 691723 - 692121 | 14574.3 |
| putative sos response-associated peptidase yedk | SAMN05444145_10259 | Not Available | Positive | 692197 - 692844 | 24538.4 |
| hypothetical protein | SAMN05444145_10260 | Not Available | Negative | 692923 - 693237 | 11562.6 |
| uncharacterized membrane protein yeaq/ymge, transglycosylase-associated protein family | SAMN05444145_10261 | Not Available | Negative | 693240 - 693500 | 9228.81 |
| pullulanase | SAMN05444145_10262 | Not Available | Negative | 693573 - 695540 | 73114.2 |
| mscs family membrane protein | SAMN05444145_10263 | Not Available | Negative | 695551 - 696621 | 39815.7 |
| hypothetical protein | SAMN05444145_10264 | Not Available | Negative | 696852 - 697814 | 35067.4 |
| hypothetical protein | SAMN05444145_10265 | Not Available | Negative | 697827 - 698999 | 42695.4 |
| protein of unknown function | SAMN05444145_10266 | Not Available | Negative | 699020 - 700102 | 38676.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
