Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kdo2-lipid iv(a) lauroyltransferase | SAMN05444145_10115 | Not Available | Positive | 21173 - 22090 | 36721.7 |
| hypothetical protein | SAMN05444145_10116 | Not Available | Positive | 22077 - 23093 | 37843.3 |
| transcriptional regulator, arac family | SAMN05444145_10117 | Not Available | Positive | 23155 - 24021 | 32695.3 |
| glutaminyl-trna synthetase | SAMN05444145_10118 | Not Available | Negative | 24115 - 25791 | 64532.6 |
| hypothetical protein | SAMN05444145_10119 | Not Available | Negative | 25800 - 26906 | 42290.4 |
| spou rrna methylase family protein | SAMN05444145_10120 | Not Available | Positive | 26988 - 27524 | 19158.0 |
| ketopantoate hydroxymethyltransferase | SAMN05444145_10121 | Not Available | Positive | 27897 - 28712 | 29415.7 |
| hmuy protein | SAMN05444145_10122 | Not Available | Negative | 28782 - 29183 | 13986.3 |
| hypothetical protein | SAMN05444145_10123 | Not Available | Negative | 29198 - 30739 | 56544.9 |
| hypothetical protein | SAMN05444145_10124 | Not Available | Negative | 30739 - 32919 | 83307.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
