Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 671042 - 671117 | Not Available |
| site-specific recombinase xerd | SAMN05444145_10238 | Not Available | Positive | 671293 - 672498 | 46576.6 |
| hypothetical protein | SAMN05444145_10239 | Not Available | Positive | 673008 - 674915 | 73805.5 |
| hypothetical protein | SAMN05444145_10240 | Not Available | Positive | 675144 - 675827 | 26588.8 |
| hypothetical protein | SAMN05444145_10241 | Not Available | Positive | 676058 - 676330 | 10009.0 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN05444145_10242 | Not Available | Positive | 676428 - 677168 | 27236.7 |
| protein of unknown function | SAMN05444145_10243 | Not Available | Positive | 677137 - 678153 | 38949.6 |
| hypothetical protein | SAMN05444145_10244 | Not Available | Negative | 678183 - 679373 | 45458.7 |
| fic family protein | SAMN05444145_10245 | Not Available | Positive | 679712 - 680449 | 28172.8 |
| leucine rich repeat-containing protein | SAMN05444145_10246 | Not Available | Positive | 681300 - 683489 | 79483.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
