Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| long-chain acyl-coa synthetase | SAMN05444145_10227 | Not Available | Positive | 653701 - 655401 | 63886.8 |
| c-terminal processing protease ctpa/prc, contains a pdz domain | SAMN05444145_10228 | Not Available | Positive | 656158 - 658971 | 106040.0 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10229 | Not Available | Positive | 659355 - 662621 | 121202.0 |
| susd family protein | SAMN05444145_10230 | Not Available | Positive | 662649 - 664301 | 61137.7 |
| substrate import-associated zinc metallohydrolase lipoprotein | SAMN05444145_10231 | Not Available | Positive | 664314 - 665237 | 35293.3 |
| protein of unknown function | SAMN05444145_10232 | Not Available | Positive | 665250 - 667112 | 67933.3 |
| histidine kinase | SAMN05444145_10233 | Not Available | Positive | 667308 - 668375 | 41367.7 |
| two component transcriptional regulator, lyttr family | SAMN05444145_10234 | Not Available | Positive | 668368 - 669108 | 28291.2 |
| type i restriction enzyme r protein n terminus (hsdr_n) | SAMN05444145_10235 | Not Available | Negative | 669121 - 669585 | 17415.0 |
| beta-galactosidase | SAMN05444145_10236 | Not Available | Positive | 669637 - 670935 | 48373.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
