Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | SAMN05444145_10217 | Not Available | Negative | 640470 - 641450 | 36371.2 |
| outer membrane protein beta-barrel domain-containing protein | SAMN05444145_10218 | Not Available | Negative | 641454 - 642050 | 21842.8 |
| fucose permease | SAMN05444145_10219 | Not Available | Negative | 642057 - 643208 | 40101.4 |
| transporter, cpa2 family | SAMN05444145_10220 | Not Available | Positive | 643427 - 645529 | 77057.5 |
| gtp-binding protein | SAMN05444145_10221 | Not Available | Positive | 645731 - 647035 | 49314.5 |
| catalase | SAMN05444145_10222 | Not Available | Positive | 647235 - 648752 | 58076.0 |
| superfamily ii dna and rna helicase | SAMN05444145_10223 | Not Available | Negative | 648821 - 650269 | 53326.2 |
| pp_00509 | SAMN05444145_10224 | Not Available | Negative | 650305 - 651669 | Not Available |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN05444145_10225 | Not Available | Negative | 651670 - 652659 | 36104.4 |
| glycerol-3-phosphate acyltransferase plsy | SAMN05444145_10226 | Not Available | Positive | 652885 - 653583 | 25525.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
