Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate permease, sulp family | SAMN05444145_1026 | Not Available | Negative | 628155 - 629846 | 60141.9 |
| iron complex outermembrane recepter protein | SAMN05444145_1028 | Not Available | Positive | 630065 - 632425 | 87963.3 |
| nicotinamide mononucleotide transporter | SAMN05444145_1029 | Not Available | Positive | 632429 - 633016 | 21829.1 |
| predicted dna-binding protein, mmcq/yjbr family | SAMN05444145_10210 | Not Available | Negative | 633055 - 633435 | 14506.3 |
| hypothetical protein | SAMN05444145_10211 | Not Available | Positive | 633521 - 634129 | 22536.8 |
| transcriptional regulator, laci family | SAMN05444145_10212 | Not Available | Positive | 634484 - 635560 | 40546.4 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444145_10213 | Not Available | Positive | 635566 - 636378 | 28783.7 |
| mannonate dehydratase | SAMN05444145_10214 | Not Available | Positive | 636545 - 637720 | 43954.6 |
| lipid kinase, yegs/rv2252/bmru family | SAMN05444145_10215 | Not Available | Negative | 637876 - 638838 | 36163.4 |
| dipeptidase d | SAMN05444145_10216 | Not Available | Negative | 638846 - 640303 | 52162.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
