Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_101493 | Not Available | Positive | 615015 - 617471 | 86125.2 |
| putative binding domain-containing protein, n-terminal | SAMN05444145_101494 | Not Available | Positive | 617511 - 621212 | 130829.0 |
| glycerophosphoryl diester phosphodiesterase | SAMN05444145_101495 | Not Available | Positive | 621216 - 622151 | 34336.7 |
| s1/p1 nuclease | SAMN05444145_101496 | Not Available | Positive | 622170 - 622961 | 30310.2 |
| mfs transporter, opa family, sugar phosphate sensor protein uhpc | SAMN05444145_101497 | Not Available | Positive | 622983 - 623164 | 7166.77 |
| thiol:disulfide interchange protein dsbd | SAMN05444145_1021 | Not Available | Positive | 623165 - 623301 | 4856.76 |
| hypothetical protein | SAMN05444145_1022 | Not Available | Positive | 623513 - 624613 | 39986.9 |
| hypothetical protein | SAMN05444145_1023 | Not Available | Positive | 624647 - 625375 | 26513.5 |
| glutamyl-trna synthetase | SAMN05444145_1024 | Not Available | Positive | 625525 - 627060 | 58008.2 |
| aldose 1-epimerase | SAMN05444145_1025 | Not Available | Positive | 627062 - 628117 | 38813.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
