Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate carboxylase subunit b | SAMN05444145_101483 | Not Available | Negative | 595682 - 597538 | 67988.2 |
| predicted purr-regulated permease perm | SAMN05444145_101484 | Not Available | Negative | 597698 - 598834 | 42473.6 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05444145_101485 | Not Available | Positive | 599140 - 602433 | 121579.0 |
| 2-haloacid dehalogenase/putative hydrolase of the had superfamily | SAMN05444145_101486 | Not Available | Negative | 602500 - 603087 | 22167.6 |
| protein of unknown function | SAMN05444145_101487 | Not Available | Positive | 603242 - 604288 | 37055.4 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444145_101488 | Not Available | Positive | 604466 - 605023 | 21714.4 |
| fecr family protein | SAMN05444145_101489 | Not Available | Positive | 605151 - 606143 | 37473.3 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_101490 | Not Available | Positive | 606308 - 609874 | 132161.0 |
| starch-binding associating with outer membrane | SAMN05444145_101491 | Not Available | Positive | 609894 - 611648 | 65489.8 |
| predicted protein | SAMN05444145_101492 | Not Available | Positive | 611681 - 614995 | 117435.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
