Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bile acid:na+ symporter, bass family | SAMN05444145_101473 | Not Available | Negative | 584139 - 585047 | 33235.1 |
| hypothetical protein | SAMN05444145_101474 | Not Available | Negative | 585049 - 585498 | 15961.5 |
| hypothetical protein | SAMN05444145_101475 | Not Available | Negative | 585529 - 588522 | 110849.0 |
| na+/proline symporter | SAMN05444145_101476 | Not Available | Negative | 588512 - 589963 | 53495.2 |
| large conductance mechanosensitive channel | SAMN05444145_101477 | Not Available | Positive | 590157 - 590642 | 17580.8 |
| arylsulfatase a | SAMN05444145_101478 | Not Available | Positive | 590813 - 592189 | 52149.2 |
| voltage-gated potassium channel | SAMN05444145_101479 | Not Available | Negative | 592205 - 592888 | 25776.2 |
| Trna-met | Not Available | Not Available | Positive | 593023 - 593096 | Not Available |
| peptide deformylase | SAMN05444145_101481 | Not Available | Positive | 593194 - 593802 | 22635.1 |
| pyruvate dehydrogenase (quinone) | SAMN05444145_101482 | Not Available | Negative | 593810 - 595546 | 62058.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
