Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | SAMN05444145_101463 | Not Available | Positive | 574615 - 575496 | 32074.7 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05444145_101464 | Not Available | Positive | 575493 - 576056 | 21003.7 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444145_101465 | Not Available | Positive | 576053 - 576913 | 31062.6 |
| dtdp-glucose 4,6-dehydratase | SAMN05444145_101466 | Not Available | Positive | 576910 - 577965 | 40349.6 |
| cys-trna(pro)/cys-trna(cys) deacylase | SAMN05444145_101467 | Not Available | Negative | 578163 - 578660 | 17929.9 |
| carboxypepd_reg-like domain-containing protein | SAMN05444145_101468 | Not Available | Positive | 578743 - 581235 | 93473.3 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed | SAMN05444145_101469 | Not Available | Positive | 581307 - 581966 | 23556.4 |
| hypothetical protein | SAMN05444145_101470 | Not Available | Positive | 581973 - 582338 | 13733.3 |
| virginiamycin a acetyltransferase | SAMN05444145_101471 | Not Available | Negative | 582297 - 582959 | 24558.0 |
| mfs transporter, fsr family, fosmidomycin resistance protein | SAMN05444145_101472 | Not Available | Negative | 582949 - 584142 | 42032.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
