Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine-specific dna-methyltransferase | SAMN05444145_101453 | Not Available | Negative | 563594 - 565198 | 61914.6 |
| deor-like helix-turn-helix domain-containing protein | SAMN05444145_101454 | Not Available | Negative | 565298 - 566335 | 39803.9 |
| hypothetical protein | SAMN05444145_101455 | Not Available | Negative | 566355 - 566717 | 14479.7 |
| phage terminase | SAMN05444145_101456 | Not Available | Negative | 566743 - 567042 | 11032.4 |
| phage terminase | SAMN05444145_101457 | Not Available | Negative | 567070 - 567471 | 15350.1 |
| nitroreductase | SAMN05444145_101458 | Not Available | Positive | 567810 - 568451 | 24005.1 |
| helix-turn-helix domain-containing protein | SAMN05444145_101459 | Not Available | Positive | 568451 - 569023 | 21779.3 |
| cu2+-exporting atpase | SAMN05444145_101460 | Not Available | Positive | 569117 - 571564 | 86886.3 |
| atpase components of abc transporters with duplicated atpase domains | SAMN05444145_101461 | Not Available | Positive | 571764 - 573347 | 58236.5 |
| uncharacterised nucleotidyltransferase | SAMN05444145_101462 | Not Available | Negative | 573383 - 574474 | 41400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
