Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein omp28 | SAMN05444145_1015 | Not Available | Negative | 7262 - 8341 | 38439.7 |
| outer membrane protein omp28 | SAMN05444145_1016 | Not Available | Negative | 8348 - 9463 | 39496.2 |
| outer membrane protein omp28 | SAMN05444145_1017 | Not Available | Negative | 9468 - 10571 | 39417.0 |
| hypothetical protein | SAMN05444145_1018 | Not Available | Negative | 10588 - 12213 | 60727.9 |
| peroxiredoxin | SAMN05444145_1019 | Not Available | Negative | 12235 - 12729 | 18106.8 |
| susd family protein | SAMN05444145_10110 | Not Available | Negative | 12831 - 14399 | 59050.4 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_10111 | Not Available | Negative | 14427 - 17048 | 96453.8 |
| hypothetical protein | SAMN05444145_10112 | Not Available | Positive | 17723 - 19042 | 46441.2 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | SAMN05444145_10113 | Not Available | Positive | 19048 - 19752 | 25974.2 |
| tigr00341 family protein | SAMN05444145_10114 | Not Available | Positive | 19774 - 21159 | 51145.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
