Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prophage tail length tape measure protein | SAMN05444145_101443 | Not Available | Positive | 551491 - 552759 | 44971.1 |
| hypothetical protein | SAMN05444145_101444 | Not Available | Positive | 552945 - 553814 | 31107.9 |
| hypothetical protein | SAMN05444145_101445 | Not Available | Negative | 554683 - 555339 | 25034.6 |
| hypothetical protein | SAMN05444145_101446 | Not Available | Negative | 555512 - 556357 | 32996.6 |
| hypothetical protein | SAMN05444145_101447 | Not Available | Negative | 556368 - 556871 | 19500.5 |
| hypothetical protein | SAMN05444145_101448 | Not Available | Positive | 557886 - 559370 | 55602.7 |
| phage portal protein, hk97 family | SAMN05444145_101449 | Not Available | Negative | 559457 - 559849 | 15100.2 |
| hypothetical protein | SAMN05444145_101450 | Not Available | Negative | 559849 - 560172 | 11893.3 |
| type iii restriction enzyme | SAMN05444145_101451 | Not Available | Negative | 560399 - 563011 | 101722.0 |
| hypothetical protein | SAMN05444145_101452 | Not Available | Negative | 563016 - 563594 | 22496.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
