Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxynorspermidine dehydrogenase | SAMN05444145_101433 | Not Available | Negative | 544096 - 545286 | 44282.6 |
| Trna-lys | Not Available | Not Available | Positive | 545506 - 545578 | Not Available |
| phage integrase sam-like domain-containing protein | SAMN05444145_101435 | Not Available | Positive | 545877 - 546569 | 26643.5 |
| phage integrase family protein | SAMN05444145_101436 | Not Available | Positive | 546685 - 547113 | 16185.9 |
| orf6n domain-containing protein | SAMN05444145_101437 | Not Available | Positive | 547125 - 547697 | 21724.5 |
| hypothetical protein | SAMN05444145_101438 | Not Available | Positive | 548223 - 548900 | 25388.5 |
| hypothetical protein | SAMN05444145_101439 | Not Available | Positive | 549239 - 549694 | 17203.6 |
| hypothetical protein | SAMN05444145_101440 | Not Available | Positive | 549782 - 550747 | 36295.4 |
| hypothetical protein | SAMN05444145_101441 | Not Available | Positive | 550723 - 551085 | 13862.8 |
| hypothetical protein | SAMN05444145_101442 | Not Available | Positive | 551078 - 551485 | 15423.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
