Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama domain-containing membrane protein rard | SAMN05444145_101423 | Not Available | Negative | 529794 - 530672 | 30811.6 |
| glycosyl transferase family 2 | SAMN05444145_101424 | Not Available | Positive | 530868 - 531716 | 31848.3 |
| peptide methionine sulfoxide reductase msra/msrb | SAMN05444145_101425 | Not Available | Negative | 531750 - 532595 | 31562.8 |
| imidazolonepropionase | SAMN05444145_101426 | Not Available | Negative | 532676 - 533923 | 45110.4 |
| histidine ammonia-lyase | SAMN05444145_101427 | Not Available | Negative | 533920 - 535401 | 54629.8 |
| urocanate hydratase | SAMN05444145_101428 | Not Available | Negative | 535418 - 537439 | 75274.1 |
| glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase | SAMN05444145_101429 | Not Available | Negative | 537441 - 539141 | 60410.5 |
| iron complex outermembrane recepter protein | SAMN05444145_101430 | Not Available | Negative | 539322 - 541304 | 72969.7 |
| cysteate synthase | SAMN05444145_101431 | Not Available | Negative | 541410 - 542702 | 47144.3 |
| carboxynorspermidine decarboxylase | SAMN05444145_101432 | Not Available | Negative | 542722 - 543861 | 42530.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
