Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444145_101413 | Not Available | Negative | 516996 - 519830 | 105856.0 |
| hypothetical protein | SAMN05444145_101414 | Not Available | Negative | 519850 - 520914 | 38885.3 |
| fimbrillin-a associated anchor protein mfa1 and mfa2 | SAMN05444145_101415 | Not Available | Negative | 520930 - 521955 | 38493.8 |
| major fimbrial subunit protein type iv, fimbrillin, c-terminal | SAMN05444145_101416 | Not Available | Negative | 521958 - 523937 | 72345.6 |
| protein of unknown function | SAMN05444145_101417 | Not Available | Negative | 523959 - 525398 | 53529.7 |
| protein of unknown function | SAMN05444145_101418 | Not Available | Negative | 525410 - 525985 | 21686.1 |
| Trna-asp | Not Available | Not Available | Positive | 526679 - 526752 | Not Available |
| cystathione beta-lyase | SAMN05444145_101420 | Not Available | Positive | 526862 - 528025 | 43513.1 |
| metal-dependent hydrolase, endonuclease/exonuclease/phosphatase family | SAMN05444145_101421 | Not Available | Positive | 528022 - 528864 | 31349.4 |
| predicted fe2+/mn2+ transporter, vit1/ccc1 family | SAMN05444145_101422 | Not Available | Negative | 528917 - 529780 | 31623.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
