Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division transport system atp-binding protein | SAMN05444145_101403 | Not Available | Positive | 506464 - 507207 | 27881.1 |
| dna gyrase subunit b | SAMN05444145_101404 | Not Available | Positive | 507326 - 509284 | 72878.4 |
| uridine kinase | SAMN05444145_101405 | Not Available | Positive | 509395 - 510024 | 23710.6 |
| dna mismatch repair protein muts | SAMN05444145_101406 | Not Available | Negative | 510112 - 512793 | 100232.0 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05444145_101407 | Not Available | Negative | 512989 - 513564 | 22009.5 |
| exodeoxyribonuclease-5 | SAMN05444145_101408 | Not Available | Negative | 513557 - 514972 | 53466.6 |
| hypothetical protein | SAMN05444145_101409 | Not Available | Positive | 515021 - 515656 | 24079.2 |
| hypothetical protein | SAMN05444145_101410 | Not Available | Positive | 515595 - 516251 | 23836.7 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN05444145_101411 | Not Available | Positive | 516242 - 516778 | 20125.1 |
| Trna-asp | Not Available | Not Available | Positive | 516834 - 516907 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
