Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101383 | Not Available | Positive | 478852 - 479370 | 19175.3 |
| surface antigen | SAMN05444145_101384 | Not Available | Positive | 479377 - 480573 | 45002.7 |
| lipid a ethanolaminephosphotransferase | SAMN05444145_101385 | Not Available | Positive | 480588 - 482300 | 65562.6 |
| histone h1-like protein hc1 | SAMN05444145_101386 | Not Available | Negative | 482409 - 482582 | 6223.58 |
| membrane fusion protein, multidrug efflux system | SAMN05444145_101387 | Not Available | Positive | 482748 - 483857 | 40092.6 |
| hydrophobic/amphiphilic exporter-1, hae1 family | SAMN05444145_101388 | Not Available | Positive | 483862 - 486999 | 112080.0 |
| outer membrane protein, multidrug efflux system | SAMN05444145_101389 | Not Available | Positive | 486996 - 488381 | 50191.7 |
| ferrous iron transport protein b | SAMN05444145_101390 | Not Available | Positive | 488494 - 491016 | 93192.9 |
| holin-like protein | SAMN05444145_101391 | Not Available | Positive | 491213 - 491584 | 13631.4 |
| tigr00659 family protein | SAMN05444145_101392 | Not Available | Positive | 491577 - 492275 | 24393.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
