Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized lipoprotein nlpe involved in copper resistance | SAMN05444145_101373 | Not Available | Positive | 469047 - 469490 | 16097.1 |
| acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase | SAMN05444145_101374 | Not Available | Positive | 469495 - 470862 | 50138.0 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444145_101375 | Not Available | Positive | 470865 - 471647 | 28752.1 |
| glucosamine--fructose-6-phosphate aminotransferase (isomerizing) | SAMN05444145_101376 | Not Available | Positive | 471771 - 473615 | 67348.8 |
| tigr02453 family protein | SAMN05444145_101377 | Not Available | Negative | 473672 - 474352 | 26151.1 |
| serine hydroxymethyltransferase | SAMN05444145_101378 | Not Available | Negative | 474354 - 475634 | 46645.2 |
| 3-oxoacyl-[acyl-carrier-protein] reductase | SAMN05444145_101379 | Not Available | Positive | 475943 - 476689 | 26171.8 |
| hypothetical protein | SAMN05444145_101380 | Not Available | Positive | 476956 - 477819 | 31857.8 |
| protein tyrosine phosphatase | SAMN05444145_101381 | Not Available | Negative | 477797 - 478285 | 18677.1 |
| putative oxidoreductase | SAMN05444145_101382 | Not Available | Positive | 478378 - 478764 | 13931.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
