Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone htpg | SAMN05444145_101363 | Not Available | Positive | 457217 - 459277 | 78857.1 |
| atp-binding cassette, subfamily f, member 3 | SAMN05444145_101364 | Not Available | Negative | 459394 - 461034 | 62097.5 |
| acyl-coa thioester hydrolase | SAMN05444145_101365 | Not Available | Negative | 461196 - 461606 | 16324.7 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05444145_101366 | Not Available | Negative | 461661 - 462251 | 21194.7 |
| redox-sensing transcriptional repressor | SAMN05444145_101367 | Not Available | Negative | 462244 - 462894 | 23788.0 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05444145_101368 | Not Available | Negative | 462902 - 464722 | 68159.9 |
| dna polymerase-3 subunit epsilon | SAMN05444145_101369 | Not Available | Negative | 464725 - 465492 | 29522.2 |
| dna polymerase iii, beta subunit | SAMN05444145_101370 | Not Available | Negative | 465503 - 466627 | 40725.2 |
| uridine phosphorylase | SAMN05444145_101371 | Not Available | Negative | 466661 - 467539 | 32349.0 |
| phosphomannomutase | SAMN05444145_101372 | Not Available | Positive | 467654 - 469042 | 50492.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
