Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxyl-terminal processing protease | SAMN05444145_101353 | Not Available | Positive | 446212 - 447783 | 56837.0 |
| protein of unknown function | SAMN05444145_101354 | Not Available | Positive | 447885 - 448181 | 11431.5 |
| putative membrane protein | SAMN05444145_101355 | Not Available | Positive | 448372 - 449313 | 34418.2 |
| shikimate dehydrogenase | SAMN05444145_101356 | Not Available | Positive | 449317 - 450054 | 26763.9 |
| tonb protein c-terminal | SAMN05444145_101357 | Not Available | Positive | 450086 - 450826 | 27988.5 |
| putative signal transducing protein | SAMN05444145_101358 | Not Available | Negative | 450913 - 451122 | 7910.47 |
| dna polymerase iii, alpha subunit | SAMN05444145_101359 | Not Available | Positive | 451245 - 455054 | 144401.0 |
| thioredoxin | SAMN05444145_101360 | Not Available | Positive | 455094 - 455408 | 11525.9 |
| aldose 1-epimerase | SAMN05444145_101361 | Not Available | Positive | 455411 - 456403 | 37308.4 |
| nitroreductase | SAMN05444145_101362 | Not Available | Negative | 456455 - 456982 | 19880.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
