Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Hypothetical protein | SAMN05444145_105256 | Not Available | Positive | 2242912 - 2243703 | 30289.8 |
| Putative thymidylate synthase protein | SAMN05444145_105257 | Not Available | Positive | 2243730 - 2244368 | 24271.3 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 1 - 56 | 18.01 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | Positive | 5 - 1536 | 18.01 |
| thiol:disulfide interchange protein dsbd | SAMN05444145_1011 | Not Available | Negative | 1 - 164 | 5829.15 |
| 23s ribosomal rna . bacterial lsu | Not Available | Not Available | Positive | 1986 - 4860 | 18.01 |
| peptidase family s41 | SAMN05444145_1012 | Not Available | Negative | 258 - 2123 | 67706.4 |
| protein of unknown function | SAMN05444145_1013 | Not Available | Negative | 2229 - 4829 | 93940.9 |
| 5s ribosomal rna . bacterial tsu | Not Available | Not Available | Positive | 4959 - 5072 | 18.01 |
| hypothetical protein | SAMN05444145_1014 | Not Available | Negative | 4898 - 7231 | 86545.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
