Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101343 | Not Available | Negative | 434385 - 435542 | 43760.8 |
| porin subfamily protein | SAMN05444145_101344 | Not Available | Positive | 435837 - 437192 | 50901.6 |
| miniconductance mechanosensitive channel | SAMN05444145_101345 | Not Available | Positive | 437405 - 438583 | 43547.4 |
| protein of unknown function | SAMN05444145_101346 | Not Available | Positive | 438599 - 438904 | 11528.3 |
| eama domain-containing membrane protein rard | SAMN05444145_101347 | Not Available | Negative | 438905 - 439819 | 32509.8 |
| poly-gamma-glutamate synthesis protein (capsule biosynthesis protein) | SAMN05444145_101348 | Not Available | Positive | 439998 - 440939 | 34129.7 |
| rubrerythrin | SAMN05444145_101349 | Not Available | Positive | 441051 - 441629 | 21947.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_101350 | Not Available | Positive | 442019 - 443005 | 37328.2 |
| atp-binding cassette protein, chvd family | SAMN05444145_101351 | Not Available | Positive | 443153 - 444826 | 62724.0 |
| histidyl-trna synthetase | SAMN05444145_101352 | Not Available | Positive | 444832 - 446175 | 50151.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
