Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two component transcriptional regulator, lyttr family | SAMN05444145_101333 | Not Available | Positive | 422036 - 422797 | 29077.9 |
| hypothetical protein | SAMN05444145_101334 | Not Available | Positive | 422915 - 423397 | 18275.6 |
| carboxypeptidase regulatory-like domain-containing protein | SAMN05444145_101335 | Not Available | Positive | 423602 - 426580 | 109316.0 |
| nitroreductase | SAMN05444145_101336 | Not Available | Negative | 426626 - 427255 | 23575.2 |
| arac-type dna-binding protein | SAMN05444145_101337 | Not Available | Positive | 427372 - 428268 | 34328.5 |
| abc-2 type transport system permease protein | SAMN05444145_101338 | Not Available | Negative | 428269 - 429498 | 45790.5 |
| abc-2 type transport system permease protein | SAMN05444145_101339 | Not Available | Negative | 429500 - 430678 | 43947.2 |
| hlyd family secretion protein | SAMN05444145_101340 | Not Available | Negative | 430682 - 431671 | 35522.7 |
| outer membrane protein tolc | SAMN05444145_101341 | Not Available | Negative | 431756 - 433207 | 53260.3 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | SAMN05444145_101342 | Not Available | Negative | 433318 - 434394 | 38749.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
