Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein lepa | SAMN05444145_101323 | Not Available | Negative | 407958 - 409748 | 66659.4 |
| diaminopimelate decarboxylase | SAMN05444145_101324 | Not Available | Positive | 409879 - 411045 | 43387.8 |
| transporter family protein | SAMN05444145_101325 | Not Available | Positive | 411088 - 411993 | 33518.9 |
| tryptophan synthase beta chain | SAMN05444145_101326 | Not Available | Negative | 412324 - 413685 | 49680.6 |
| phenylalanyl-trna synthetase beta subunit | SAMN05444145_101327 | Not Available | Positive | 414021 - 416486 | 90682.9 |
| uncharacterized membrane protein yhhn | SAMN05444145_101328 | Not Available | Positive | 416556 - 417200 | 23602.6 |
| hexosaminidase | SAMN05444145_101329 | Not Available | Negative | 417163 - 419322 | 81019.2 |
| xtp/ditp diphosphohydrolase | SAMN05444145_101330 | Not Available | Positive | 419395 - 420171 | 29489.8 |
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05444145_101331 | Not Available | Positive | 420188 - 420721 | 19363.2 |
| rho termination factor, rna-binding domain | SAMN05444145_101332 | Not Available | Positive | 420732 - 422039 | 49902.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
