Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerol kinase | SAMN05444145_101313 | Not Available | Negative | 388812 - 390305 | 54796.1 |
| hypothetical protein | SAMN05444145_101314 | Not Available | Negative | 390595 - 393204 | 96048.4 |
| starch-binding associating with outer membrane | SAMN05444145_101315 | Not Available | Negative | 393222 - 394832 | 61884.5 |
| tonb-linked outer membrane protein, susc/raga family | SAMN05444145_101316 | Not Available | Negative | 394845 - 397736 | 106152.0 |
| signal transduction histidine kinase | SAMN05444145_101317 | Not Available | Negative | 397874 - 401899 | 151414.0 |
| duf1680 family protein | SAMN05444145_101318 | Not Available | Negative | 401917 - 403971 | 77622.9 |
| transaldolase | SAMN05444145_101319 | Not Available | Positive | 404174 - 404830 | 23509.3 |
| alcohol dehydrogenase/hypothetical protein/alcohol dehydrogenase | SAMN05444145_101320 | Not Available | Positive | 404830 - 405870 | 38019.7 |
| Trna-gly | Not Available | Not Available | Positive | 405905 - 405980 | Not Available |
| long-chain acyl-coa synthetase | SAMN05444145_101322 | Not Available | Negative | 406046 - 407953 | 70627.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
