Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444145_101303 | Not Available | Negative | 378157 - 379161 | 38499.2 |
| predicted metal-binding protein | SAMN05444145_101304 | Not Available | Negative | 379262 - 379834 | 21392.5 |
| hypothetical protein | SAMN05444145_101305 | Not Available | Positive | 380016 - 380381 | 13284.0 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMN05444145_101306 | Not Available | Negative | 380524 - 380994 | 17313.5 |
| ribonucleoside-triphosphate reductase | SAMN05444145_101307 | Not Available | Negative | 380996 - 383089 | 80312.5 |
| s1/p1 nuclease | SAMN05444145_101308 | Not Available | Negative | 383619 - 384389 | 29473.9 |
| transcription termination factor rho | SAMN05444145_101309 | Not Available | Negative | 384416 - 386044 | 59951.6 |
| transcriptional regulator, arac family | SAMN05444145_101310 | Not Available | Negative | 386358 - 387254 | 34565.8 |
| flavodoxin | SAMN05444145_101311 | Not Available | Positive | 387419 - 387982 | 19937.0 |
| glycerol uptake facilitator protein | SAMN05444145_101312 | Not Available | Negative | 388065 - 388808 | 25938.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
