Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-glucose 4,6-dehydratase | SAMN05444145_101284 | Not Available | Negative | 359514 - 360665 | 44516.5 |
| dtdp-4-dehydrorhamnose reductase | SAMN05444145_101285 | Not Available | Negative | 360667 - 361578 | 34014.5 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | SAMN05444145_101286 | Not Available | Negative | 361575 - 362159 | 22596.7 |
| glucose-1-phosphate thymidylyltransferase | SAMN05444145_101287 | Not Available | Negative | 362163 - 363068 | 33401.3 |
| tyrosine-protein phosphatase ywqe | SAMN05444145_101288 | Not Available | Negative | 363065 - 363772 | 27278.1 |
| capsular exopolysaccharide family | SAMN05444145_101289 | Not Available | Negative | 363785 - 366211 | 91102.2 |
| polysaccharide export outer membrane protein | SAMN05444145_101290 | Not Available | Negative | 366225 - 367022 | 29163.2 |
| udp-n-acetylmuramyl pentapeptide phosphotransferase/udp-n-acetylglucosamine-1-phosphate transferase | SAMN05444145_101291 | Not Available | Negative | 367061 - 368227 | 42550.0 |
| hypothetical protein | SAMN05444145_101292 | Not Available | Negative | 368275 - 368742 | 18304.8 |
| transcription antitermination factor nusg | SAMN05444145_101293 | Not Available | Negative | 368720 - 369751 | 40250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
