Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-glucosidase | SAMN05444145_101264 | Not Available | Negative | 335567 - 337789 | 80970.7 |
| gdp-l-fucose synthase | SAMN05444145_101265 | Not Available | Negative | 338147 - 339088 | 35593.6 |
| gdpmannose 4,6-dehydratase | SAMN05444145_101266 | Not Available | Negative | 339096 - 340184 | 40926.8 |
| n-acetylglucosaminyldiphosphoundecaprenol n-acetyl-beta-d-mannosaminyltransferase | SAMN05444145_101267 | Not Available | Negative | 340341 - 341090 | 29081.3 |
| glycosyl transferases group 1 | SAMN05444145_101268 | Not Available | Negative | 341113 - 342288 | 43973.6 |
| tupa-like atpgrasp | SAMN05444145_101269 | Not Available | Negative | 342342 - 342620 | 10548.9 |
| tupa-like atpgrasp | SAMN05444145_101270 | Not Available | Negative | 342760 - 343653 | 35114.3 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN05444145_101271 | Not Available | Negative | 343637 - 344836 | 45747.9 |
| o-antigen ligase | SAMN05444145_101272 | Not Available | Negative | 344826 - 345755 | 34673.0 |
| gdsl-like lipase/acylhydrolase | SAMN05444145_101273 | Not Available | Negative | 346043 - 346939 | 34547.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
