Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Rikenellaceae
Genus
Alistipes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Rikenellaceae |
| Genus | Alistipes |
| Species | Alistipes timonensis |
| Strain | JC136 strain DSM 25383 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
724649 bp
Thymine Count
711172 bp
Guanine Count
1019996 bp
Cytosine Count
1032776 bp
Genome Length
3488964 bp
Protein-coding Genes
2681 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444145_101254 | Not Available | Positive | 324501 - 325550 | 39370.3 |
| signal transduction histidine kinase | SAMN05444145_101255 | Not Available | Negative | 325589 - 327295 | 63945.6 |
| two-component system, ompr family, sensor histidine kinase kdpd | SAMN05444145_101256 | Not Available | Negative | 327299 - 328420 | 42132.4 |
| hypothetical protein | SAMN05444145_101257 | Not Available | Negative | 328423 - 329178 | 27314.6 |
| k+-transporting atpase atpase c chain | SAMN05444145_101258 | Not Available | Negative | 329183 - 329752 | 20005.0 |
| k+-transporting atpase atpase b chain | SAMN05444145_101259 | Not Available | Negative | 329768 - 331810 | 72608.0 |
| k+-transporting atpase atpase a chain | SAMN05444145_101260 | Not Available | Negative | 331824 - 333515 | 61288.6 |
| hypothetical protein | SAMN05444145_101261 | Not Available | Negative | 333606 - 333701 | 3691.71 |
| hypothetical protein | SAMN05444145_101262 | Not Available | Negative | 333698 - 333817 | 4440.98 |
| two-component system, ntrc family, response regulator | SAMN05444145_101263 | Not Available | Negative | 333992 - 335326 | 48992.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
